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  • Home
  • About me
    • Address
    • C.V.
    • Travel
  • Projects
    • EMDB
    • Computational Bioimaging
      • Particle picking using SVMs
      • Model-free classification of views
      • Extending Chimera
    • Systems biology
      • Protein function
        prediction
      • Soft clustering
      • Network inference
    • Software
      • EMPI
      • TomoPlane
  • Links

The following is a rather incomplete and unordered collection of links pertaining to our research.

Bioimaging and bioinformatics:

Electron-microscopy Software and Resources

  • Software tools for molecular microscopy (Wikipedia page)
  • EMAN (Steve Ludtke's group, Houston)
  • Chimera (CGL, UC San Francisco)
  • SPARX (Python/C++next-generation single particle software)
  • IMOD (Tomography package from the Boulder Laboratory for 3-Dimensional Electron Microscopy of Cells)
  • BSOFT (Bernard Heymann's software package from NIH, Betheda, MD)
  • Xmipp (C++ software from CNB, Madrid, Spain)
  • SPIDER (from Wadsworth Center, Albany, NY)
  • LEGINON (Automated microscopy software, Scripps)

Institutions

Collaborative Institutions

2009-02-17 19:07 CET     xris